PF13380


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13380, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13380
Description CoA binding domain

Occurence in the database

PF13380 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1264 FBDBKF_07370 160031 160444 1 yccU putative CoA-binding protein Morganella morganii S1
1 group_1574 FBDBKF_10205 134422 137079 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S1
2 group_1264 EHELCC_03600 25742 26155 -1 yccU putative CoA-binding protein Morganella morganii S2
3 group_1574 EHELCC_05005 326387 329044 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S2
4 group_1264 NLDBIP_03600 25538 25951 -1 yccU putative CoA-binding protein Morganella morganii S4
5 group_1574 NLDBIP_05005 326183 328840 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S4
6 group_1264 LHKJJB_09430 25652 26065 -1 yccU putative CoA-binding protein Morganella morganii S3
7 group_1574 LHKJJB_13625 6538 9195 -1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S3
8 group_1264 HKOGLL_09545 164987 165400 1 yccU putative CoA-binding protein Morganella morganii S5
9 group_1574 HKOGLL_12910 135203 137860 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S5
10 group_1574 F4V73_RS00125 32897 35545 -1 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase Morganella psychrotolerans
11 group_1264 F4V73_RS01555 348485 348898 1 CoA-binding protein Morganella psychrotolerans
12 group_1574 PMI_RS01960 460731 463391 -1 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase Proteus mirabilis HI4320
13 group_1264 PMI_RS03885 881242 881655 1 CoA-binding protein Proteus mirabilis HI4320