PF13371


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF13371
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF13371
Description Tetratricopeptide repeat

Occurence in the database

PF13371 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_686 FBDBKF_01935 74372 75178 1 sirB1 invasion regulator SirB1 Morganella morganii S1
1 group_686 EHELCC_02405 462192 462998 1 sirB1 invasion regulator SirB1 Morganella morganii S2
2 group_686 NLDBIP_01055 217138 217944 -1 sirB1 invasion regulator SirB1 Morganella morganii S4
3 group_686 LHKJJB_00980 174741 175547 1 sirB1 invasion regulator SirB1 Morganella morganii S3
4 group_686 HKOGLL_01020 180252 181058 1 sirB1 invasion regulator SirB1 Morganella morganii S5
5 group_686 F4V73_RS04280 904613 905419 1 sirB1 invasion regulator SirB1 Morganella psychrotolerans
6 group_686 PMI_RS05275 1152454 1153269 1 sirB1 invasion regulator SirB1 Proteus mirabilis HI4320