PF13304


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13304, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13304
Description AAA domain, putative AbiEii toxin, Type IV TA system

Occurence in the database

PF13304 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_183 F4V73_RS11315 403673 405466 -1 AAA family ATPase Morganella psychrotolerans
1 group_3695 PMI_RS04640 1026096 1027733 1 AAA family ATPase Proteus mirabilis HI4320
2 group_3695 PMI_RS06995 1528470 1529564 -1 ATP-binding protein Proteus mirabilis HI4320
3 group_3695 PMI_RS11650 2573613 2574920 -1 AAA family ATPase Proteus mirabilis HI4320
4 group_183 PMI_RS12045 2663903 2665867 -1 AAA family ATPase Proteus mirabilis HI4320