PF13264


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13264, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13264
Description Domain of unknown function (DUF4055)

Occurence in the database

PF13264 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2460 FBDBKF_00110 18999 20378 -1 DUF4055 domain-containing protein Morganella morganii S1
1 group_2460 EHELCC_01435 288490 289869 1 DUF4055 domain-containing protein Morganella morganii S2
2 group_2460 NLDBIP_02025 390267 391646 -1 DUF4055 domain-containing protein Morganella morganii S4
3 group_2460 LHKJJB_00010 1039 2418 1 DUF4055 domain-containing protein Morganella morganii S3
4 group_2460 HKOGLL_00050 6550 7929 1 DUF4055 domain-containing protein Morganella morganii S5
5 group_2460 PMI_RS02470 548562 549932 1 DUF4055 domain-containing protein Proteus mirabilis HI4320