PF13218


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13218, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13218
Description Protein of unknown function (DUF4026) N-terminal

Occurence in the database

PF13218 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1618 FBDBKF_10670 101504 102934 1 yegJ DUF2314 domain-containing protein Morganella morganii S1
1 group_1618 EHELCC_15005 101494 102924 1 yegJ DUF2314 domain-containing protein Morganella morganii S2
2 group_1618 NLDBIP_14835 101494 102924 1 yegJ DUF2314 domain-containing protein Morganella morganii S4
3 group_1618 LHKJJB_14510 38802 40232 -1 yegJ DUF2314 domain-containing protein Morganella morganii S3
4 group_1618 HKOGLL_13130 38802 40232 -1 yegJ DUF2314 domain-containing protein Morganella morganii S5
5 group_1618 F4V73_RS14380 104628 106064 1 DUF4026 domain-containing protein Morganella psychrotolerans
6 group_1618 PMI_RS14430 3201668 3203116 1 DUF4026 domain-containing protein Proteus mirabilis HI4320