PF13018


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13018, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13018
Description Extended Signal Peptide of Type V secretion system

Occurence in the database

PF13018 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3288 FBDBKF_09085 35301 42578 -1 aidA Autotransporter adhesin AidA Morganella morganii S1
1 group_3288 EHELCC_10325 103526 110803 1 aidA Autotransporter adhesin AidA Morganella morganii S2
2 group_3288 NLDBIP_10670 81797 89074 1 aidA Autotransporter adhesin AidA Morganella morganii S4
3 group_3288 LHKJJB_10685 102454 109731 -1 aidA Autotransporter adhesin AidA Morganella morganii S3
4 group_3288 HKOGLL_13745 35755 43032 -1 aidA Autotransporter adhesin AidA Morganella morganii S5
5 group_3732 F4V73_RS12495 82783 90567 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans