PF12832


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12832, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12832
Description MFS_1 like family

Occurence in the database

PF12832 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_530 FBDBKF_01155 214303 215454 -1 3-phenylpropionate MFS transporter Morganella morganii S1
1 group_530 EHELCC_00390 93414 94565 1 3-phenylpropionate MFS transporter Morganella morganii S2
2 group_530 NLDBIP_03070 585571 586722 -1 3-phenylpropionate MFS transporter Morganella morganii S4
3 group_530 LHKJJB_04585 192812 193963 -1 3-phenylpropionate MFS transporter Morganella morganii S3
4 group_530 HKOGLL_02460 93619 94770 1 3-phenylpropionate MFS transporter Morganella morganii S5
5 group_530 F4V73_RS07230 1503242 1504381 -1 3-phenylpropionate MFS transporter Morganella psychrotolerans
6 group_530 PMI_RS09210 2006654 2007829 -1 3-phenylpropionate MFS transporter Proteus mirabilis HI4320