PF12158


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12158, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12158
Description Protein of unknown function (DUF3592)

Occurence in the database

PF12158 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3257 FBDBKF_06080 40810 41505 1 DUF3592 domain-containing protein Morganella morganii S1
1 group_2772 FBDBKF_07840 94179 94694 -1 DUF3592 domain-containing protein Morganella morganii S1
2 group_3257 EHELCC_09125 41382 42077 1 DUF3592 domain-containing protein Morganella morganii S2
3 group_2772 EHELCC_13670 68373 68888 -1 DUF3592 domain-containing protein Morganella morganii S2
4 group_3257 NLDBIP_09505 41382 42077 1 DUF3592 domain-containing protein Morganella morganii S4
5 group_2772 NLDBIP_14115 89248 89763 -1 DUF3592 domain-containing protein Morganella morganii S4
6 group_3257 LHKJJB_08250 175161 175856 -1 DUF3592 domain-containing protein Morganella morganii S3
7 group_2772 LHKJJB_08735 69986 70501 1 DUF3592 domain-containing protein Morganella morganii S3
8 group_3257 HKOGLL_07800 175161 175856 -1 DUF3592 domain-containing protein Morganella morganii S5
9 group_2772 HKOGLL_08285 69986 70501 1 DUF3592 domain-containing protein Morganella morganii S5