PF11924


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11924, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11924
Description Inverse autotransporter, beta-domain

Occurence in the database

PF11924 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_25 FBDBKF_09475 122348 132379 -1 Big-1 domain-containing protein Morganella morganii S1
1 group_25 FBDBKF_09485 134164 140745 -1 Big-1 domain-containing protein Morganella morganii S1
2 group_25 EHELCC_09925 5359 11940 1 Big-1 domain-containing protein Morganella morganii S2
3 group_25 EHELCC_09935 13725 23756 1 Big-1 domain-containing protein Morganella morganii S2
4 group_25 NLDBIP_19245 5357 11938 1 Big-1 domain-containing protein Morganella morganii S4
5 group_25 NLDBIP_19255 13723 21948 1 Big-1 domain-containing protein Morganella morganii S4
6 group_25 LHKJJB_19115 121 8346 -1 Big-1 domain-containing protein Morganella morganii S3
7 group_25 LHKJJB_19125 10131 16712 -1 Big-1 domain-containing protein Morganella morganii S3
8 group_25 HKOGLL_18895 121 8346 -1 Big-1 domain-containing protein Morganella morganii S5
9 group_25 HKOGLL_18905 10131 16712 -1 Big-1 domain-containing protein Morganella morganii S5
10 group_25 F4V73_RS10495 216304 222888 1 invasin domain 3-containing protein Morganella psychrotolerans
11 group_25 F4V73_RS10505 224824 234594 1 Ig-like domain-containing protein Morganella psychrotolerans
12 group_3725 F4V73_RS12075 569289 573139 1 inverse autotransporter beta domain-containing protein Morganella psychrotolerans
13 group_25 PMI_RS00110 37240 44316 -1 Ig-like domain-containing protein Proteus mirabilis HI4320