PF11444


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11444, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11444
Description Protein of unknown function (DUF2895)

Occurence in the database

PF11444 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_121 FBDBKF_03990 197530 198174 -1 DUF2895 domain-containing protein Morganella morganii S1
1 group_121 FBDBKF_16815 42398 43057 -1 TIGR03746 family integrating conjugative element protein Morganella morganii S1
2 group_121 EHELCC_06545 48929 49573 1 DUF2895 domain-containing protein Morganella morganii S2
3 group_121 EHELCC_10645 170714 171373 1 TIGR03746 family integrating conjugative element protein Morganella morganii S2
4 group_121 NLDBIP_06870 48802 49446 1 DUF2895 domain-containing protein Morganella morganii S4
5 group_121 NLDBIP_10990 148985 149644 1 TIGR03746 family integrating conjugative element protein Morganella morganii S4
6 group_121 LHKJJB_06405 12548 13192 1 DUF2895 domain-containing protein Morganella morganii S3
7 group_121 LHKJJB_10365 41884 42543 -1 TIGR03746 family integrating conjugative element protein Morganella morganii S3
8 group_121 HKOGLL_04525 220195 220839 -1 DUF2895 domain-containing protein Morganella morganii S5
9 group_121 HKOGLL_16530 41893 42552 -1 TIGR03746 family integrating conjugative element protein Morganella morganii S5
10 group_121 PMI_RS12745 2820454 2821098 -1 TIGR03746 family integrating conjugative element protein Proteus mirabilis HI4320