PF11308


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11308, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11308
Description Glycosyl hydrolases related to GH101 family, GH129

Occurence in the database

PF11308 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2510 FBDBKF_02020 91899 94085 -1 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 Morganella morganii S1
1 group_2510 EHELCC_02490 479719 481905 -1 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 Morganella morganii S2
2 group_2510 NLDBIP_00970 198231 200417 1 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 Morganella morganii S4
3 group_2510 LHKJJB_01065 192268 194454 -1 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 Morganella morganii S3
4 group_2510 HKOGLL_01105 197779 199965 -1 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 Morganella morganii S5
5 group_2510 F4V73_RS04385 927430 929619 -1 glycoside hydrolase Morganella psychrotolerans