PF11287


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11287, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11287
Description Protein of unknown function (DUF3088)

Occurence in the database

PF11287 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3604 FBDBKF_19990 14237 14545 -1 DUF3088 domain-containing protein Morganella morganii S1
1 group_3604 EHELCC_07625 877 1185 1 DUF3088 domain-containing protein Morganella morganii S2
2 group_3604 NLDBIP_07950 877 1185 1 DUF3088 domain-containing protein Morganella morganii S4
3 group_3604 LHKJJB_06315 255974 256282 -1 DUF3088 domain-containing protein Morganella morganii S3
4 group_3604 HKOGLL_19170 14243 14551 -1 DUF3088 domain-containing protein Morganella morganii S5