PF11190


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11190, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11190
Description Protein of unknown function (DUF2976)

Occurence in the database

PF11190 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2637 FBDBKF_04000 198596 198964 -1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S1
1 group_3486 FBDBKF_16825 43434 43781 -1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S1
2 group_2637 EHELCC_06535 48139 48507 1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S2
3 group_3486 EHELCC_10635 169990 170337 1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S2
4 group_2637 NLDBIP_06860 48012 48380 1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S4
5 group_3486 NLDBIP_10980 148261 148608 1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S4
6 group_2637 LHKJJB_06395 11758 12126 1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S3
7 group_3486 LHKJJB_10375 42920 43267 -1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S3
8 group_2637 HKOGLL_04535 221261 221629 -1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S5
9 group_3486 HKOGLL_16540 42929 43276 -1 TIGR03745 family integrating conjugative element membrane protein Morganella morganii S5
10 group_2637 PMI_RS12755 2821520 2821888 -1 TIGR03745 family integrating conjugative element membrane protein Proteus mirabilis HI4320