PF11072


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11072, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11072
Description Protein of unknown function (DUF2859)

Occurence in the database

PF11072 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2642 FBDBKF_04035 203650 204204 -1 Integrating conjugative element protein Morganella morganii S1
1 group_3594 FBDBKF_19850 13597 14106 1 Integrating conjugative element protein Morganella morganii S1
2 group_2642 EHELCC_06500 42899 43453 1 Integrating conjugative element protein Morganella morganii S2
3 group_3594 EHELCC_10575 160291 160800 1 Integrating conjugative element protein Morganella morganii S2
4 group_2642 NLDBIP_06825 42772 43326 1 Integrating conjugative element protein Morganella morganii S4
5 group_3594 NLDBIP_10920 138562 139071 1 Integrating conjugative element protein Morganella morganii S4
6 group_2642 LHKJJB_06360 6518 7072 1 Integrating conjugative element protein Morganella morganii S3
7 group_3594 LHKJJB_10435 52457 52966 -1 Integrating conjugative element protein Morganella morganii S3
8 group_2642 HKOGLL_04570 226315 226869 -1 Integrating conjugative element protein Morganella morganii S5
9 group_3594 HKOGLL_16600 52466 52975 -1 Integrating conjugative element protein Morganella morganii S5
10 group_2642 PMI_RS12790 2826574 2827128 -1 integrating conjugative element protein Proteus mirabilis HI4320