PF10588


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10588, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10588
Description NADH-ubiquinone oxidoreductase-G iron-sulfur binding region

Occurence in the database

PF10588 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1894 FBDBKF_14140 21938 24670 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S1
1 group_1894 EHELCC_08140 92315 95047 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S2
2 group_1894 NLDBIP_08465 92315 95047 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S4
3 group_1894 LHKJJB_05800 162112 164844 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S3
4 group_1894 HKOGLL_05115 76906 79638 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S5
5 group_1894 F4V73_RS02795 589704 592427 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella psychrotolerans
6 group_1894 PMI_RS08620 1880929 1883652 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Proteus mirabilis HI4320