PF10458


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF10458
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF10458
Description Valyl tRNA synthetase tRNA binding arm

Occurence in the database

PF10458 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1486 FBDBKF_08830 145011 147908 -1 valS valine--tRNA ligase Morganella morganii S1
1 group_1486 EHELCC_12695 15817 18714 1 valS valine--tRNA ligase Morganella morganii S2
2 group_1486 NLDBIP_13035 15817 18714 1 valS valine--tRNA ligase Morganella morganii S4
3 group_1486 LHKJJB_13520 143729 146626 -1 valS valine--tRNA ligase Morganella morganii S3
4 group_1486 HKOGLL_11510 15817 18714 1 valS valine--tRNA ligase Morganella morganii S5
5 group_1486 F4V73_RS10050 115491 118346 -1 valine--tRNA ligase Morganella psychrotolerans
6 group_1486 PMI_RS17255 3787654 3790542 -1 valine--tRNA ligase Proteus mirabilis HI4320