PF09078


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09078, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09078
Description CheY binding

Occurence in the database

PF09078 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_484 FBDBKF_00795 145412 147484 -1 cheA chemotaxis protein CheA Morganella morganii S1
1 group_484 EHELCC_00750 161384 163456 1 cheA chemotaxis protein CheA Morganella morganii S2
2 group_484 NLDBIP_02710 516680 518752 -1 cheA chemotaxis protein CheA Morganella morganii S4
3 group_484 LHKJJB_04225 123921 125993 -1 cheA chemotaxis protein CheA Morganella morganii S3
4 group_484 HKOGLL_02820 161589 163661 1 cheA chemotaxis protein CheA Morganella morganii S5
5 group_484 F4V73_RS06795 1410338 1412392 -1 cheA chemotaxis protein CheA Morganella psychrotolerans
6 group_484 PMI_RS08145 1779883 1782102 -1 cheA chemotaxis protein CheA Proteus mirabilis HI4320