PF08956


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08956, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08956
Description Domain of unknown function (DUF1869)

Occurence in the database

PF08956 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1267 FBDBKF_07435 170373 170714 -1 DUF1869 domain-containing protein Morganella morganii S1
1 group_1267 EHELCC_03535 15472 15813 1 DUF1869 domain-containing protein Morganella morganii S2
2 group_1267 NLDBIP_03535 15268 15609 1 DUF1869 domain-containing protein Morganella morganii S4
3 group_1267 LHKJJB_09365 15382 15723 1 DUF1869 domain-containing protein Morganella morganii S3
4 group_1267 HKOGLL_09610 175329 175670 -1 DUF1869 domain-containing protein Morganella morganii S5
5 group_1267 F4V73_RS01655 364472 364813 -1 DUF1869 domain-containing protein Morganella psychrotolerans
6 group_1267 PMI_RS03915 884080 884424 -1 DUF1869 domain-containing protein Proteus mirabilis HI4320