PF08774


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08774, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08774
Description VRR-NUC domain

Occurence in the database

PF08774 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3477 FBDBKF_16715 23190 24635 -1 VRR-NUC domain-containing protein Morganella morganii S1
1 group_3477 EHELCC_10745 189136 190581 1 VRR-NUC domain-containing protein Morganella morganii S2
2 group_3477 NLDBIP_11090 167407 168852 1 VRR-NUC domain-containing protein Morganella morganii S4
3 group_3477 LHKJJB_10265 22676 24121 -1 VRR-NUC domain-containing protein Morganella morganii S3
4 group_3477 HKOGLL_16430 22685 24130 -1 VRR-NUC domain-containing protein Morganella morganii S5