PF08545


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08545, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08545
Description 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

Occurence in the database

PF08545 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_385 FBDBKF_14725 42468 43421 -1 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III Morganella morganii S1
1 group_385 EHELCC_15530 72544 73497 -1 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III Morganella morganii S2
2 group_385 NLDBIP_16060 72544 73497 -1 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III Morganella morganii S4
3 group_385 LHKJJB_15780 43189 44142 1 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III Morganella morganii S3
4 group_385 HKOGLL_14900 42401 43354 1 fabH 3-oxoacyl-[acyl-carrier-protein] synthase III Morganella morganii S5
5 group_385 F4V73_RS07520 1571190 1572143 -1 beta-ketoacyl-ACP synthase III Morganella psychrotolerans
6 group_385 F4V73_RS16255 62183 63181 -1 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein Morganella psychrotolerans
7 group_385 PMI_RS04215 949259 950212 1 beta-ketoacyl-ACP synthase III Proteus mirabilis HI4320