PF08544


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08544, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08544
Description GHMP kinases C terminal

Occurence in the database

PF08544 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_608 FBDBKF_01910 69388 70263 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella morganii S1
1 group_1140 FBDBKF_06525 144728 145660 -1 thrB homoserine kinase Morganella morganii S1
2 group_2865 FBDBKF_11065 36621 37775 1 galK galactokinase Morganella morganii S1
3 group_608 EHELCC_02380 457208 458083 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella morganii S2
4 group_2865 EHELCC_05160 21693 22847 -1 galK galactokinase Morganella morganii S2
5 group_1140 EHELCC_09570 145300 146232 -1 thrB homoserine kinase Morganella morganii S2
6 group_608 NLDBIP_01080 222053 222928 1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella morganii S4
7 group_2865 NLDBIP_05480 62758 63912 -1 galK galactokinase Morganella morganii S4
8 group_1140 NLDBIP_09950 145300 146232 -1 thrB homoserine kinase Morganella morganii S4
9 group_608 LHKJJB_00955 169757 170632 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella morganii S3
10 group_2865 LHKJJB_02360 40282 41436 -1 galK galactokinase Morganella morganii S3
11 group_1140 LHKJJB_07805 71006 71938 1 thrB homoserine kinase Morganella morganii S3
12 group_608 HKOGLL_00995 175268 176143 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella morganii S5
13 group_1140 HKOGLL_07355 71006 71938 1 thrB homoserine kinase Morganella morganii S5
14 group_2865 HKOGLL_15740 63722 64876 -1 galK galactokinase Morganella morganii S5
15 group_608 F4V73_RS04255 899606 900484 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Morganella psychrotolerans
16 group_1140 F4V73_RS15405 67909 68841 1 thrB homoserine kinase Morganella psychrotolerans
17 group_1140 PMI_RS00010 2799 3728 1 thrB homoserine kinase Proteus mirabilis HI4320
18 group_608 PMI_RS05250 1147505 1148380 -1 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Proteus mirabilis HI4320
19 group_2865 PMI_RS09605 2098110 2099282 -1 galK galactokinase Proteus mirabilis HI4320