PF08328


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08328, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08328
Description Adenylosuccinate lyase C-terminal

Occurence in the database

PF08328 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1942 FBDBKF_14570 8072 9439 1 purB adenylosuccinate lyase Morganella morganii S1
1 group_1942 EHELCC_15375 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S2
2 group_1942 NLDBIP_15905 38148 39515 1 purB adenylosuccinate lyase Morganella morganii S4
3 group_1942 LHKJJB_15935 77171 78538 -1 purB adenylosuccinate lyase Morganella morganii S3
4 group_1942 HKOGLL_15055 76383 77750 -1 purB adenylosuccinate lyase Morganella morganii S5
5 group_1942 F4V73_RS07365 1536308 1537675 1 purB adenylosuccinate lyase Morganella psychrotolerans
6 group_1942 PMI_RS04355 978518 979888 -1 purB adenylosuccinate lyase Proteus mirabilis HI4320