PF08212


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08212, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08212
Description Lipocalin-like domain

Occurence in the database

PF08212 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3141 FBDBKF_00130 22863 23378 -1 Outer membrane lipoprotein Blc Morganella morganii S1
1 group_3141 EHELCC_01415 285490 286005 1 Outer membrane lipoprotein Blc Morganella morganii S2
2 group_3141 NLDBIP_02045 394131 394646 -1 Outer membrane lipoprotein Blc Morganella morganii S4
3 group_3141 LHKJJB_03560 1372 1887 -1 Outer membrane lipoprotein Blc Morganella morganii S3
4 group_3141 HKOGLL_00030 3550 4065 1 Outer membrane lipoprotein Blc Morganella morganii S5