PF08047


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08047, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08047
Description Histidine operon leader peptide

Occurence in the database

PF08047 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2716 FBDBKF_06935 51839 51886 -1 his operon leader peptide Morganella morganii S1
1 group_2716 EHELCC_04035 134300 134347 1 his operon leader peptide Morganella morganii S2
2 group_2716 NLDBIP_04035 134096 134143 1 his operon leader peptide Morganella morganii S4
3 group_2716 LHKJJB_09865 134210 134257 1 his operon leader peptide Morganella morganii S3
4 group_2716 HKOGLL_09110 56795 56842 -1 his operon leader peptide Morganella morganii S5
5 group_2716 F4V73_RS01120 236769 236816 -1 hisL his operon leader peptide Morganella psychrotolerans