PF07728


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07728, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 3 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07728
Description AAA domain (dynein-related subfamily)

Occurence in the database

PF07728 is associated with 3 different proteins (see tab "Protein list" and "Profile")
The 3 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3864 F4V73_RS18020 47431 48732 -1 AAA family ATPase Morganella psychrotolerans
1 group_4358 PMI_RS02755 601039 602148 -1 AAA family ATPase Proteus mirabilis HI4320
2 group_3864 PMI_RS12090 2673304 2674263 -1 CbbQ/NirQ/NorQ C-terminal domain-containing protein Proteus mirabilis HI4320