PF07678


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07678, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07678
Description A-macroglobulin TED domain

Occurence in the database

PF07678 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_517 FBDBKF_01090 199797 204821 -1 yfaS Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family Morganella morganii S1
1 group_517 EHELCC_00455 104047 109071 1 yfaS Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family Morganella morganii S2
2 group_517 NLDBIP_03005 571065 576089 -1 yfaS Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family Morganella morganii S4
3 group_517 LHKJJB_04520 178306 183330 -1 yfaS Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family Morganella morganii S3
4 group_517 HKOGLL_02525 104252 109276 1 yfaS Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family Morganella morganii S5
5 group_517 F4V73_RS07160 1487732 1492768 -1 alpha-2-macroglobulin Morganella psychrotolerans
6 group_517 PMI_RS09135 1989655 1994745 -1 alpha-2-macroglobulin Proteus mirabilis HI4320