PF07445


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07445, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07445
Description Primosomal replication protein priC

Occurence in the database

PF07445 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2129 FBDBKF_15995 52724 53269 -1 priC Primosomal replication protein N'' Morganella morganii S1
1 group_2129 EHELCC_18600 10158 10703 -1 priC Primosomal replication protein N'' Morganella morganii S2
2 group_2129 NLDBIP_17430 40163 40708 -1 priC Primosomal replication protein N'' Morganella morganii S4
3 group_2129 LHKJJB_17230 15480 16025 1 priC Primosomal replication protein N'' Morganella morganii S3
4 group_2129 HKOGLL_17165 40163 40708 -1 priC Primosomal replication protein N'' Morganella morganii S5
5 group_2129 F4V73_RS16315 76950 77495 1 primosomal replication protein Morganella psychrotolerans
6 group_2129 PMI_RS00660 171125 171667 -1 primosomal replication protein Proteus mirabilis HI4320