PF07287


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07287, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07287
Description Acyclic terpene utilisation family protein AtuA

Occurence in the database

PF07287 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2731 FBDBKF_07485 9903 11276 1 atuA Acyclic terpene utilization AtuA family protein Morganella morganii S1
1 group_2731 EHELCC_17155 37553 38926 1 atuA Acyclic terpene utilization AtuA family protein Morganella morganii S2
2 group_2731 NLDBIP_13760 4972 6345 1 atuA Acyclic terpene utilization AtuA family protein Morganella morganii S4
3 group_2731 LHKJJB_09090 153404 154777 -1 atuA Acyclic terpene utilization AtuA family protein Morganella morganii S3
4 group_2731 HKOGLL_08640 153404 154777 -1 atuA Acyclic terpene utilization AtuA family protein Morganella morganii S5
5 group_2731 F4V73_RS13630 360579 361952 -1 acyclic terpene utilization AtuA family protein Morganella psychrotolerans