PF07282


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07282, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07282
Description Putative transposase DNA-binding domain

Occurence in the database

PF07282 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_103 F4V73_RS01570 349983 351191 1 RNA-guided endonuclease TnpB family protein Morganella psychrotolerans
1 group_103 PMI_RS04865 1065048 1066256 1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
2 group_103 PMI_RS11565 2550554 2551762 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
3 group_103 PMI_RS12360 2739680 2740888 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
4 group_103 PMI_RS14775 3276463 3277671 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
5 group_103 PMI_RS15005 3329488 3330696 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
6 group_103 PMI_RS15220 3377854 3379011 1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
7 group_103 PMI_RS16440 3625497 3626705 1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
8 group_103 PMI_RS16835 3706972 3708180 1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
9 group_103 PMI_RS17430 3826053 3827252 1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
10 group_103 PMI_RS17610 3863776 3864984 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320
11 group_103 PMI_RS18460 4053155 4054363 -1 RNA-guided endonuclease TnpB family protein Proteus mirabilis HI4320