PF07278


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07278, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07278
Description Protein of unknown function (DUF1441)

Occurence in the database

PF07278 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_366 FBDBKF_13125 18522 19025 -1 DUF1441 domain-containing protein Morganella morganii S1
1 group_366 EHELCC_19470 5957 6460 -1 DUF1441 domain-containing protein Morganella morganii S2
2 group_366 NLDBIP_09295 256166 256669 1 DUF1441 domain-containing protein Morganella morganii S4
3 group_366 NLDBIP_19030 490 993 -1 DUF1441 domain-containing protein Morganella morganii S4
4 group_366 LHKJJB_04970 490 993 -1 DUF1441 domain-containing protein Morganella morganii S3
5 group_366 LHKJJB_18920 490 993 -1 DUF1441 domain-containing protein Morganella morganii S3
6 group_366 HKOGLL_05945 240757 241260 1 DUF1441 domain-containing protein Morganella morganii S5
7 group_366 F4V73_RS02080 445841 446344 1 DUF1441 family protein Morganella psychrotolerans