PF07017


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07017, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07017
Description Antimicrobial peptide resistance and lipid A acylation protein PagP

Occurence in the database

PF07017 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2181 FBDBKF_16425 9299 9904 -1 pagP lipid IV(A) palmitoyltransferase PagP Morganella morganii S1
1 group_2181 EHELCC_08290 126285 126890 -1 pagP lipid IV(A) palmitoyltransferase PagP Morganella morganii S2
2 group_2181 NLDBIP_08615 126285 126890 -1 pagP lipid IV(A) palmitoyltransferase PagP Morganella morganii S4
3 group_2181 LHKJJB_05650 130269 130874 1 pagP lipid IV(A) palmitoyltransferase PagP Morganella morganii S3
4 group_2181 HKOGLL_05265 110876 111481 -1 pagP lipid IV(A) palmitoyltransferase PagP Morganella morganii S5
5 group_2181 F4V73_RS02945 624580 625185 -1 pagP lipid IV(A) palmitoyltransferase PagP Morganella psychrotolerans
6 group_2181 PMI_RS07780 1704212 1704850 1 pagP lipid IV(A) palmitoyltransferase PagP Proteus mirabilis HI4320