PF06992


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06992, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06992
Description Replication protein P

Occurence in the database

PF06992 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2468 FBDBKF_00230 34107 34802 -1 DNA replication protein Morganella morganii S1
1 group_3552 FBDBKF_18520 24981 25454 -1 Putative phage replication protein Morganella morganii S1
2 group_2468 EHELCC_01315 274066 274761 1 DNA replication protein Morganella morganii S2
3 group_3552 EHELCC_01865 362387 362860 1 Putative phage replication protein Morganella morganii S2
4 group_3552 NLDBIP_01595 317276 317749 -1 Putative phage replication protein Morganella morganii S4
5 group_2468 NLDBIP_02145 405375 406070 -1 DNA replication protein Morganella morganii S4
6 group_3552 LHKJJB_00440 74936 75409 1 Putative phage replication protein Morganella morganii S3
7 group_2468 LHKJJB_03660 12616 13311 -1 DNA replication protein Morganella morganii S3
8 group_3552 HKOGLL_00480 80447 80920 1 Putative phage replication protein Morganella morganii S5
9 group_2468 HKOGLL_03385 274271 274966 1 DNA replication protein Morganella morganii S5
10 group_2468 F4V73_RS06225 1304375 1305067 -1 replication protein P Morganella psychrotolerans