PF06725


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06725, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06725
Description 3D domain

Occurence in the database

PF06725 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1079 FBDBKF_06120 47074 48171 -1 mltA murein transglycosylase A Morganella morganii S1
1 group_1079 EHELCC_09165 47646 48743 -1 mltA murein transglycosylase A Morganella morganii S2
2 group_1079 NLDBIP_09545 47646 48743 -1 mltA murein transglycosylase A Morganella morganii S4
3 group_1079 LHKJJB_08210 168495 169592 1 mltA murein transglycosylase A Morganella morganii S3
4 group_1079 HKOGLL_07760 168495 169592 1 mltA murein transglycosylase A Morganella morganii S5
5 group_1079 F4V73_RS15795 166216 167313 1 mltA murein transglycosylase A Morganella psychrotolerans
6 group_1079 PMI_RS11385 2505027 2506121 -1 mltA murein transglycosylase A Proteus mirabilis HI4320