PF05939


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05939, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 23 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05939
Description Phage minor tail protein

Occurence in the database

PF05939 is associated with 23 different proteins (see tab "Protein list" and "Profile")
The 23 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_104 FBDBKF_00055 9414 9743 -1 Phage-related protein Morganella morganii S1
1 group_104 FBDBKF_11490 94986 95315 1 Phage-related protein Morganella morganii S1
2 group_102 FBDBKF_18580 5645 5980 -1 Phage tail protein Morganella morganii S1
3 group_102 FBDBKF_19350 3957 4292 -1 Phage tail protein Morganella morganii S1
4 group_104 EHELCC_01490 299125 299454 1 Phage-related protein Morganella morganii S2
5 group_102 EHELCC_15155 5645 5980 -1 Phage tail protein Morganella morganii S2
6 group_104 EHELCC_17725 5400 5729 -1 Phage-related protein Morganella morganii S2
7 group_102 EHELCC_19310 9111 9446 1 Phage tail protein Morganella morganii S2
8 group_104 NLDBIP_01970 380682 381011 -1 Phage-related protein Morganella morganii S4
9 group_104 NLDBIP_05055 5226 5555 -1 Phage-related protein Morganella morganii S4
10 group_102 NLDBIP_15685 5645 5980 -1 Phage tail protein Morganella morganii S4
11 group_102 NLDBIP_19440 9111 9446 1 Phage tail protein Morganella morganii S4
12 group_104 LHKJJB_00065 11674 12003 1 Phage-related protein Morganella morganii S3
13 group_102 LHKJJB_16155 110706 111041 1 Phage tail protein Morganella morganii S3
14 group_104 LHKJJB_19170 4887 5216 -1 Phage-related protein Morganella morganii S3
15 group_102 LHKJJB_19365 3957 4292 -1 Phage tail protein Morganella morganii S3
16 group_104 HKOGLL_00105 17185 17514 1 Phage-related protein Morganella morganii S5
17 group_102 HKOGLL_15275 109918 110253 1 Phage tail protein Morganella morganii S5
18 group_104 HKOGLL_15315 6190 6519 -1 Phage-related protein Morganella morganii S5
19 group_102 HKOGLL_19245 9111 9446 1 Phage tail protein Morganella morganii S5
20 group_104 F4V73_RS02205 465504 465833 1 phage tail protein Morganella psychrotolerans
21 group_102 F4V73_RS18180 79006 79338 -1 phage tail protein Morganella psychrotolerans
22 group_102 PMI_RS02590 566044 566385 1 phage tail protein Proteus mirabilis HI4320