PF05651


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05651, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05651
Description Putative sugar diacid recognition

Occurence in the database

PF05651 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2611 FBDBKF_03505 106114 107235 -1 cdaR Sugar diacid utilization regulator CdaR Morganella morganii S1
1 group_2611 EHELCC_07030 139868 140989 1 cdaR Sugar diacid utilization regulator CdaR Morganella morganii S2
2 group_2611 NLDBIP_07355 139741 140862 1 cdaR Sugar diacid utilization regulator CdaR Morganella morganii S4
3 group_2611 LHKJJB_06890 103487 104608 1 cdaR Sugar diacid utilization regulator CdaR Morganella morganii S3
4 group_2611 HKOGLL_04040 128779 129900 -1 cdaR Sugar diacid utilization regulator CdaR Morganella morganii S5
5 group_2611 F4V73_RS11395 420804 421928 1 sugar diacid recognition domain-containing protein Morganella psychrotolerans