PF05400


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05400, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05400
Description Flagellar protein FliT

Occurence in the database

PF05400 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_447 FBDBKF_00540 91972 92361 1 fliT Flagellar protein FliT Morganella morganii S1
1 group_447 EHELCC_01005 216507 216896 -1 fliT Flagellar protein FliT Morganella morganii S2
2 group_447 NLDBIP_02455 463240 463629 1 fliT Flagellar protein FliT Morganella morganii S4
3 group_447 LHKJJB_03970 70481 70870 1 fliT Flagellar protein FliT Morganella morganii S3
4 group_447 HKOGLL_03075 216712 217101 -1 fliT Flagellar protein FliT Morganella morganii S5
5 group_447 F4V73_RS06555 1369316 1369705 1 fliT flagellar protein FliT Morganella psychrotolerans
6 group_447 PMI_RS07930 1738358 1738711 1 fliT flagellar protein FliT Proteus mirabilis HI4320