PF05368


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05368, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05368
Description NmrA-like family

Occurence in the database

PF05368 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2444 FBDBKF_20125 10688 11536 1 ybjT DUF2867 domain-containing protein Morganella morganii S1
1 group_2444 EHELCC_19340 1161 2009 -1 ybjT DUF2867 domain-containing protein Morganella morganii S2
2 group_2444 NLDBIP_19470 1161 2009 -1 ybjT DUF2867 domain-containing protein Morganella morganii S4
3 group_2444 LHKJJB_19480 10938 11786 1 ybjT DUF2867 domain-containing protein Morganella morganii S3
4 group_2444 HKOGLL_19350 1161 2009 -1 ybjT DUF2867 domain-containing protein Morganella morganii S5
5 group_2444 F4V73_RS05315 1128976 1129851 1 NmrA family NAD(P)-binding protein Morganella psychrotolerans
6 group_2444 PMI_RS04765 1048142 1048990 1 SDR family oxidoreductase Proteus mirabilis HI4320