PF05257


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05257, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05257
Description CHAP domain

Occurence in the database

PF05257 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_910 FBDBKF_04840 173128 175020 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella morganii S1
1 group_3351 FBDBKF_11355 74014 74496 1 Peptidase C51 domain-containing protein Morganella morganii S1
2 group_910 EHELCC_06130 232585 234477 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella morganii S2
3 group_3351 EHELCC_17860 26219 26701 -1 Peptidase C51 domain-containing protein Morganella morganii S2
4 group_3351 NLDBIP_05190 26045 26527 -1 Peptidase C51 domain-containing protein Morganella morganii S4
5 group_910 NLDBIP_06450 273650 275542 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella morganii S4
6 group_3351 LHKJJB_02070 3569 4051 -1 Peptidase C51 domain-containing protein Morganella morganii S3
7 group_910 LHKJJB_03330 251174 253066 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella morganii S3
8 group_910 HKOGLL_06805 173038 174930 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella morganii S5
9 group_3351 HKOGLL_15450 27009 27491 -1 Peptidase C51 domain-containing protein Morganella morganii S5
10 group_910 F4V73_RS09290 1948623 1950512 -1 gss bifunctional glutathionylspermidine amidase/synthase Morganella psychrotolerans
11 group_910 PMI_RS00885 217066 218943 1 gss bifunctional glutathionylspermidine amidase/synthase Proteus mirabilis HI4320