PF05194


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05194, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05194
Description UreE urease accessory protein, C-terminal domain

Occurence in the database

PF05194 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2707 FBDBKF_06650 170549 171226 -1 ureE Urease accessory protein UreE Morganella morganii S1
1 group_2707 EHELCC_09695 171121 171798 -1 ureE Urease accessory protein UreE Morganella morganii S2
2 group_2707 NLDBIP_10075 171121 171798 -1 ureE Urease accessory protein UreE Morganella morganii S4
3 group_2707 LHKJJB_07680 45440 46117 1 ureE Urease accessory protein UreE Morganella morganii S3
4 group_2707 HKOGLL_07230 45440 46117 1 ureE Urease accessory protein UreE Morganella morganii S5
5 group_4742 PMI_RS18340 4027106 4027591 1 ureE urease accessory protein UreE Proteus mirabilis HI4320