PF05135


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05135, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05135
Description Phage gp6-like head-tail connector protein

Occurence in the database

PF05135 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3560 FBDBKF_18615 11118 11420 -1 head-tail connector protein Morganella morganii S1
1 group_3580 FBDBKF_19390 9774 10094 -1 head-tail connector protein Morganella morganii S1
2 group_3560 EHELCC_15190 11118 11420 -1 head-tail connector protein Morganella morganii S2
3 group_3580 EHELCC_19270 3309 3629 1 head-tail connector protein Morganella morganii S2
4 group_3560 NLDBIP_15720 11118 11420 -1 head-tail connector protein Morganella morganii S4
5 group_3580 NLDBIP_19400 3309 3629 1 head-tail connector protein Morganella morganii S4
6 group_3560 LHKJJB_16120 105266 105568 1 head-tail connector protein Morganella morganii S3
7 group_3580 LHKJJB_19405 9774 10094 -1 head-tail connector protein Morganella morganii S3
8 group_3560 HKOGLL_15240 104478 104780 1 head-tail connector protein Morganella morganii S5
9 group_3580 HKOGLL_19205 3309 3629 1 head-tail connector protein Morganella morganii S5