PF04383


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04383, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04383
Description KilA-N domain

Occurence in the database

PF04383 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3354 FBDBKF_11375 75670 76212 1 KilA-N domain-containing protein Morganella morganii S1
1 group_3653 FBDBKF_12365 2129 2917 -1 KilA-N domain-containing protein Morganella morganii S1
2 group_3772 FBDBKF_13055 4883 5665 -1 DNA-binding protein Morganella morganii S1
3 group_3354 EHELCC_17840 24503 25045 -1 KilA-N domain-containing protein Morganella morganii S2
4 group_3653 EHELCC_19120 2308 3096 -1 KilA-N domain-containing protein Morganella morganii S2
5 group_3354 NLDBIP_05170 24329 24871 -1 KilA-N domain-containing protein Morganella morganii S4
6 group_3653 NLDBIP_19090 8247 9035 -1 KilA-N domain-containing protein Morganella morganii S4
7 group_3354 LHKJJB_02050 1853 2395 -1 KilA-N domain-containing protein Morganella morganii S3
8 group_3653 LHKJJB_18980 8247 9035 -1 KilA-N domain-containing protein Morganella morganii S3
9 group_3772 HKOGLL_06015 254117 254899 1 DNA-binding protein Morganella morganii S5
10 group_3354 HKOGLL_15430 25293 25835 -1 KilA-N domain-containing protein Morganella morganii S5