PF04346


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04346, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04346
Description Ethanolamine utilisation protein, EutH

Occurence in the database

PF04346 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2740 FBDBKF_07585 28162 29427 1 eutH ethanolamine utilization protein EutH Morganella morganii S1
1 group_2740 EHELCC_13415 2356 3621 1 eutH ethanolamine utilization protein EutH Morganella morganii S2
2 group_2740 NLDBIP_13860 23231 24496 1 eutH ethanolamine utilization protein EutH Morganella morganii S4
3 group_2740 LHKJJB_08990 135253 136518 -1 eutH ethanolamine utilization protein EutH Morganella morganii S3
4 group_2740 HKOGLL_08540 135253 136518 -1 eutH ethanolamine utilization protein EutH Morganella morganii S5
5 group_2740 F4V73_RS13535 341410 342681 -1 eutH ethanolamine utilization protein EutH Morganella psychrotolerans