PF04310


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04310, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04310
Description MukB N-terminal

Occurence in the database

PF04310 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1241 FBDBKF_07220 117204 121691 1 mukB chromosome partition protein MukB Morganella morganii S1
1 group_1241 EHELCC_03750 64495 68982 -1 mukB chromosome partition protein MukB Morganella morganii S2
2 group_1241 NLDBIP_03750 64291 68778 -1 mukB chromosome partition protein MukB Morganella morganii S4
3 group_1241 LHKJJB_09580 64405 68892 -1 mukB chromosome partition protein MukB Morganella morganii S3
4 group_1241 HKOGLL_09395 122160 126647 1 mukB chromosome partition protein MukB Morganella morganii S5
5 group_1241 F4V73_RS01405 305492 309976 1 mukB chromosome partition protein MukB Morganella psychrotolerans
6 group_1241 PMI_RS03575 797533 801990 1 mukB chromosome partition protein MukB Proteus mirabilis HI4320