PF04233


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04233, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04233
Description Phage Mu protein F like protein

Occurence in the database

PF04233 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2459 FBDBKF_00105 17934 18995 -1 Phage head morphogenesis protein Morganella morganii S1
1 group_3357 FBDBKF_11405 80668 81579 1 Phage head morphogenesis protein Morganella morganii S1
2 group_3769 FBDBKF_12790 65663 66454 -1 Phage head morphogenesis protein Morganella morganii S1
3 group_2459 EHELCC_01440 289873 290934 1 Phage head morphogenesis protein Morganella morganii S2
4 group_3357 EHELCC_17810 19136 20047 -1 Phage head morphogenesis protein Morganella morganii S2
5 group_2459 NLDBIP_02020 389202 390263 -1 Phage head morphogenesis protein Morganella morganii S4
6 group_3357 NLDBIP_05140 18962 19873 -1 Phage head morphogenesis protein Morganella morganii S4
7 group_2459 LHKJJB_00015 2422 3483 1 Phage head morphogenesis protein Morganella morganii S3
8 group_3357 LHKJJB_19255 18623 19534 -1 Phage head morphogenesis protein Morganella morganii S3
9 group_2459 HKOGLL_00055 7933 8994 1 Phage head morphogenesis protein Morganella morganii S5
10 group_3357 HKOGLL_15400 19926 20837 -1 Phage head morphogenesis protein Morganella morganii S5
11 group_3769 F4V73_RS06130 1294224 1294958 -1 phage minor head protein Morganella psychrotolerans
12 group_2459 PMI_RS02475 549929 551050 1 hypothetical protein Proteus mirabilis HI4320