PF04222


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04222, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04222
Description Protein of unknown function (DUF416)

Occurence in the database

PF04222 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2302 FBDBKF_17690 34135 34725 1 yjaG DUF416 domain-containing protein Morganella morganii S1
1 group_2302 EHELCC_18175 33511 34101 1 yjaG DUF416 domain-containing protein Morganella morganii S2
2 group_2302 NLDBIP_17975 4636 5226 -1 yjaG DUF416 domain-containing protein Morganella morganii S4
3 group_2302 LHKJJB_18170 4636 5226 -1 yjaG DUF416 domain-containing protein Morganella morganii S3
4 group_2302 HKOGLL_18030 33511 34101 1 yjaG DUF416 domain-containing protein Morganella morganii S5
5 group_2302 F4V73_RS15070 252825 253415 1 YjaG family protein Morganella psychrotolerans
6 group_2302 PMI_RS13690 3042319 3042909 -1 YjaG family protein Proteus mirabilis HI4320