PF04214


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04214, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04214
Description Protein of unknown function, DUF

Occurence in the database

PF04214 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2152 FBDBKF_16190 27169 27612 -1 DUF411 domain-containing protein Morganella morganii S1
1 group_2152 EHELCC_16225 27169 27612 -1 DUF411 domain-containing protein Morganella morganii S2
2 group_2152 NLDBIP_17115 34558 35001 1 DUF411 domain-containing protein Morganella morganii S4
3 group_2152 LHKJJB_17035 37660 38103 1 DUF411 domain-containing protein Morganella morganii S3
4 group_2152 HKOGLL_16805 27169 27612 -1 DUF411 domain-containing protein Morganella morganii S5
5 group_2152 F4V73_RS17435 118006 118446 1 DUF411 domain-containing protein Morganella psychrotolerans
6 group_2152 PMI_RS15270 3388399 3388848 -1 DUF411 domain-containing protein Proteus mirabilis HI4320