PF03951


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03951, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03951
Description Glutamine synthetase, beta-Grasp domain

Occurence in the database

PF03951 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1734 FBDBKF_12100 74426 75835 1 glnA glutamate--ammonia ligase Morganella morganii S1
1 group_1734 EHELCC_14205 58870 60279 -1 glnA glutamate--ammonia ligase Morganella morganii S2
2 group_1734 NLDBIP_15300 62807 64216 -1 glnA glutamate--ammonia ligase Morganella morganii S4
3 group_1734 LHKJJB_15310 74426 75835 1 glnA glutamate--ammonia ligase Morganella morganii S3
4 group_1734 HKOGLL_14430 61089 62498 1 glnA glutamate--ammonia ligase Morganella morganii S5
5 group_1734 F4V73_RS14540 138341 139750 -1 glnA glutamate--ammonia ligase Morganella psychrotolerans
6 group_1734 PMI_RS14245 3160361 3161770 1 glnA glutamate--ammonia ligase Proteus mirabilis HI4320