PF03923


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03923, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03923
Description Uncharacterized lipoprotein

Occurence in the database

PF03923 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2108 FBDBKF_15855 21722 22303 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S1
1 group_2108 EHELCC_18455 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S2
2 group_2108 NLDBIP_17290 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S4
3 group_2108 LHKJJB_17370 46446 47027 1 yajG Uncharacterized lipoprotein YajG Morganella morganii S3
4 group_2108 HKOGLL_17025 9161 9742 -1 yajG Uncharacterized lipoprotein YajG Morganella morganii S5
5 group_2108 F4V73_RS16455 109330 109911 1 YajG family lipoprotein Morganella psychrotolerans
6 group_2108 PMI_RS00540 139896 140474 -1 lipoprotein Proteus mirabilis HI4320