PF03916


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03916, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03916
Description Polysulphide reductase, NrfD

Occurence in the database

PF03916 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_493 FBDBKF_00890 161134 162198 -1 ttrC tetrathionate reductase subunit TtrC Morganella morganii S1
1 group_2405 FBDBKF_19275 2631 3812 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S1
2 group_493 EHELCC_00655 146670 147734 1 ttrC tetrathionate reductase subunit TtrC Morganella morganii S2
3 group_2405 EHELCC_07560 249722 250903 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S2
4 group_493 NLDBIP_02805 532402 533466 -1 ttrC tetrathionate reductase subunit TtrC Morganella morganii S4
5 group_2405 NLDBIP_07885 249595 250776 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S4
6 group_493 LHKJJB_04320 139643 140707 -1 ttrC tetrathionate reductase subunit TtrC Morganella morganii S3
7 group_2405 LHKJJB_07420 213341 214522 1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S3
8 group_493 HKOGLL_02725 146875 147939 1 ttrC tetrathionate reductase subunit TtrC Morganella morganii S5
9 group_2405 HKOGLL_03510 18865 20046 -1 hybB Ni/Fe-hydrogenase cytochrome b subunit Morganella morganii S5
10 group_493 F4V73_RS06885 1426887 1427951 -1 ttrC tetrathionate reductase subunit TtrC Morganella psychrotolerans
11 group_493 PMI_RS08230 1798336 1799364 -1 ttrC tetrathionate reductase subunit TtrC Proteus mirabilis HI4320