PF03884


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03884, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03884
Description DNA gyrase inhibitor YacG

Occurence in the database

PF03884 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_846 FBDBKF_04280 44142 44348 1 yacG DNA gyrase inhibitor YacG Morganella morganii S1
1 group_846 EHELCC_05570 103599 103805 1 yacG DNA gyrase inhibitor YacG Morganella morganii S2
2 group_846 NLDBIP_05890 144664 144870 1 yacG DNA gyrase inhibitor YacG Morganella morganii S4
3 group_846 LHKJJB_02770 122188 122394 1 yacG DNA gyrase inhibitor YacG Morganella morganii S3
4 group_846 HKOGLL_06245 44052 44258 1 yacG DNA gyrase inhibitor YacG Morganella morganii S5
5 group_846 F4V73_RS08725 1805245 1805451 1 yacG DNA gyrase inhibitor YacG Morganella psychrotolerans
6 group_846 PMI_RS10125 2211886 2212101 1 yacG DNA gyrase inhibitor YacG Proteus mirabilis HI4320